MASIC MS/MS Automated Selected Ion Chromatogram generator
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MASIC Tags

generator chromatogram editor chromatogram Chromatogram Viewer Chromatogram Lister molecular ion ion ion charge Automated complaint generator ion solvation LC-MS/MS analysis ion chromatogram ion generator convenient chromatogram view chromatogram display chromatogram ion radiotherapy ion equlibria

MASIC Description

MASIC is a professional application designed to generate selected ion chromatograms (SICs) for all of the parent ions chosen for fragmentation in a LC-MS/MS analysis. The SICs are generated using the LC-MS data, then each SIC is processed using a peak finding algorithm to characterize the chromatographic peaks, providing peak statistics including elution time of the peak apex, peak area, and peak signal/noise. MASIC can read Finnigan .Raw files, mzXML files, mzData files or .cdf/.mgf combo files. Results are outputted both as flat files (.txt) and in an XML file that can be read using the accompanying graphical results browser. The browser provides a fast, graphical method for browsing the SICs identified by MASIC, allowing the user to sort and filter the SIC list as desired. MASIC has been in routine use in the PRISM pipeline since 2004 and has been used to process over 40,000 datasets. MASIC has also been updated to provide basic support for MRM datasets.

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