MetaPAT Find metabolic pathways alignments with this app.
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MetaPAT Ranking & Summary

MetaPAT Tags

Analyze find Finder metabolic rate basal metabolic rate basel metabolic rate metabolic metabolic reaction metabolic manipulation visualize metabolic pathway metabolic pathway viewer metabolic flux analysis analyze metabolic flux 13C metabolic flux KEGG metabolic pathway analyze metabolic data metabolic data analyzer RNA 3D alignments metabolic pathway analyze pathways metabolic pathways viewer edit metabolic pathways manage metabolic pathways view sequence alignments sequence alignments viewer analyze sequence alignments high-scoring homeorphisms nucleotide alignments visualize biological pathways biological pathways viewer analyze biological pathways view alignments profile alignments checker create metabolic networks metabolic networks designer generate metabolic networks metabolic networks metabolic syndrome metabolic control analysis

MetaPAT Description

MetaPAT is a handy, easy to use tool specially designed to help you with the alignment of metabolic pathways. For given pattern and host pathway, it finds all high-scoring homeorphisms between the pattern and a subgraph of the host. Scoring is performed by calculating the similarity between two aligned enzymes using a scoring scheme introduced by Tohsato et al. MetaPAT uses the fit-match algorithm as described in . It features a graphical user interface for an easy setup of algorithm parameters. The results can be viewed in the internal viewer and exported in various image formats.

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