SW A simple library for sequence alignment that can be used with multiple GPUs
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Align align sequence sequence alignment Sequence alignment

SW Description

Sequence alignment based on CUDA enabled GPUs SW# (swsharp) is a library for sequence alignment based on CUDA enabled GPUs. It utilizes Hirschbergs and Ukkonens algorithm for memory efficiency and additional speed up. The library is scalable for use with multiple GPUs. Some parts of the library utilize MPI for CUDA enabled clusters.

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