SigInt SigInt is a command-line software tool that can rank mammalian proteins/genes
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SigInt Ranking & Summary

SigInt Tags

rank protein proteins visualisation HLA genes rank mammalian proteins rank genes mammalian signalome mammalian mammalian genomic sequence find orthologous genes analyze membrane proteins membrane proteins analysis mammalian microRNA genes mutation

SigInt Description

SigInt is a command-line software utility that can be used to find and rank mammalian proteins/genes that specifically and significantly interact with a list of proteins/genes in context of a background mammalian signalome and interactome networks. The inputs to the program are: · a seed list of human Entrez Gene gene symbols, · a background networks in SIG format, and · a name for the output file (web-page file name with the htm extension) SigInt outputs a sorted list of genes/proteins that interacts with components from the seed list. These components are sorted by a z-score that measures the specificity of these intermediate components to interact with the genes/proteins from the seed list.

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