TreesimJ Simulate population genetics with this tool.
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TreesimJ Tags

simulation simulate simulator population mutation population display population world population world population displayer population counter Population Clock population estimate population checker Mendelian genetics simulation analyze Mendelian genetics Mendelian genetics analysis emulated genetics transmission genetics Genetics Lab genetics research genetics population genetics evolution population distribution genetics algorithm population genetics simulator population genetics Simulate Population Bottleneck Population Bottleneck population genetic simulator Population Simulator Population Dynamics population monitor autotetraploid population transmission genetics analysis simulate transmission genetics population admixture estimate population parameters effective population size population genetic structure Wright-Fisher generations simulate evolving DNA simulate evolutionary genetics simulate population population simulation demographic population genetic population define population groups population group haploid population simulate conductor population stratification analyze population population analysis population-genetic simulation

TreesimJ Description

TreesimJ is a flexible, easy to use, Java based application specially designed to offer users a population genetic simulator. It tracks the state of a population evolving in forward time via discrete, Wright-Fisher generations. It also maintains the full genealogical tree of the population and allows for collecting sample trees which can be analyzed, exported and logged. It can also simulate evolving DNA under a variety of assumptions regarding mutation and selection. TreesimJ is very flexible, meaning that a wide variety of fitness models, demographic models, and data collectors are supported, and new models are easy to write

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