VisANT Pathway analysis made easy.
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VisANT Tags

analyzer analysis Analyze network analysis visualize metabolic pathway metabolic pathway viewer KEGG metabolic pathway pathway visualization biochemical system pathway adverse outcome pathway adverse effect pathway biological pathway pathway model Pathway Editor Signal transduction pathway Genetic transduction pathway Pathway biological pathway navigation metabolic pathway analyze pathways view pathway pathway retrieval pathway analysis view biological pathway analyze biological pathway webmail hack free java mp4 radio templates .psd sample consulting invoice very fast avi nokia 2710 netflix free magic disc res to cab siedler 2 karten-betrachter jessica rabbit screensaver mightyfax 3.39 rep convert free java antiv

VisANT Description

VisANT is a unique, handy, easy to use, simple application specially designed to help you with network and pathway analysis. VisANT is written using the Java development language. Main features: Network Module Enrichment Analysis (NMEA) to detect phenotypic difference between two data sets (e.g. gene expression of disease v.s. normal), try out NMEA for cell cycle pathway in P53 mutant data. NMEA is deigned to find functional modules that inform phenotypic differences. For the current release, such differences are usually transcriptional activity. NMEA by default will be performed for all non-embedded metanodes. The function is available under the Expression menu and requires the input of expression data (sample expression data). When execution of NMEA is complete, the nodes in the modules will be colored according to their enrichment scores GO Term Enrichment Analysis (GOTEA) to find the over-represented GO terms in network modules. The function is available under the Metagraph menu and requires genes in the modules being annotated. Batch mode automates database queries for interactions, name resolutions, and GO annotations, Batch mode to automate batch processes in the background and to handle large-scale networks with millions nodes and edges. Meta-Graph: multi-scale visualization of bio-networks, ideal for network of functional modules, Fast batch loading of large interaction data set through Interaction Statistics page. Flexible Visual Schema of the network: Customized node&edge annotation, Integrative Data-Mining: 405k+ functional associations (Experimental:98924, Computational:307017) for 103 species, name normalization for Yeast, Fly, Homo sapiens etc., Adjustable high performance, supports large-network, test has been performed with 226k+ edges and nodes Easy http linking to your network and built-in support of high resolution SVG Expression overlay of the network/pathway Integrated expression data-based recommendation system for gene in the same pathway/complex/network Exploratory navigation of KEGG pathways. Support of weighted network using edge thickness, or edge color , or both.

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