EMBL/FASTA Wrapper for WebSphere Information Integrator A tool that enables access, retrieval, and federation of bio-sequences and data stored in flat-file, specialized data sources in either EMBL or FASTA format
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EMBL/FASTA Wrapper for WebSphere Information Integrator Ranking & Summary

EMBL/FASTA Wrapper for WebSphere Information Integrator Tags

wrapper file retrieval Fasta Converter Fasta Compare Data Sources retrieval tool bio chycles bio FASTA editor data retrieval stored data data sources ABI to FASTA bio-informatics Bio-Informatics tool bio-informatic tool bio-informatic fasta sequence database view fasta federate bio-sequence FASTA Wrapper EMBL Wrapper bio-sequence federate data sources mapper edit Fasta analyze fasta file validate fasta Fasta comparer fasta file analysis fasta file viewer analyze FASTA sequnece view fasta file edit fasta file manage FASTA file FASTA file manipulator export fasta file fasta file analyzer analyze EMBL files EMBL file analyzer search fasta file Access to flat file bio data format

EMBL/FASTA Wrapper for WebSphere Information Integrator Description

A huge amount of bioinformatical data is currently stored within flat files in numerous specialized databases, both public and private, set up in past decades by research institutions and laboratories all around the world. Accessing information stored in such databases is not a trivial task because specific bioinformatic tools and algorithms are required. Moreover, these tools often expose non-standard interfaces and query languages that make difficult such activities as integration or interoperation of these data sources. Among the dozens of formats for protein and DNA sequences stored in flat files, EMBL and FASTA certainly are widely used. EMBL/FASTA Wrapper for WebSphere Information Integrator enables applications as well as users to retrieve protein and DNA sequences and data stored in flat-file databases in either EMBL or FASTA format by using SQL as the query language. Thanks to key features provided by WebSphere Information Integrator and this non-relational wrapper, users can virtually "bring" EMBL/FASTA data into their federated databases in order not only to query a single, flat-file database, but to compose "federated queries" actually solved against both relational and non-relational data sources. EMBL/FASTA Wrapper for WebSphere Information Integrator allows handling of flat-file data sources just as relational databases are handled (for example, the LIKE SQL statement is supported for querying non-sequence parts of EMBL and FASTA entries.) Give EMBL/FASTA Wrapper for WebSphere Information Integrator a try to fully asses its capabilities!

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